Biotechnology - Genomic and Proteomics/IP Profile of Universities working in BGP: Difference between revisions
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** '''BIO-X ([http://biox.stanford.edu/biox/index.html http://biox.stanford.edu/biox/index.html])''' | ** '''BIO-X ([http://biox.stanford.edu/biox/index.html http://biox.stanford.edu/biox/index.html])''' | ||
*** '''Specific aim to foster collaboration between scientists, engineers, computer scientists, and clinicians in the biotech sector''' | *** '''Specific aim to foster collaboration between scientists, engineers, computer scientists, and clinicians in the biotech sector''' | ||
==Berkeley== | ===Berkeley=== | ||
** '''Center for Integrative Genomics (http://cigbrowser.berkeley.edu/)''' | ** '''Center for Integrative Genomics (http://cigbrowser.berkeley.edu/)''' | ||
*** '''Collaborative project between several different departments to compare genome sequences of a wide variety of animals''' | *** '''Collaborative project between several different departments to compare genome sequences of a wide variety of animals''' | ||
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** Department of Plant and Microbial Biology (http://pmb.berkeley.edu/) | ** Department of Plant and Microbial Biology (http://pmb.berkeley.edu/) | ||
*** studies plant genomics | *** studies plant genomics | ||
==UC San Diego== | ===UC San Diego=== | ||
** Department of Bioengineering ([http://www-bioeng.ucsd.edu/who/ http://www-bioeng.ucsd.edu/who/]) | ** Department of Bioengineering ([http://www-bioeng.ucsd.edu/who/ http://www-bioeng.ucsd.edu/who/]) | ||
** Genomics and Systems Biotechnology Laboratory ([http://gsbl.ucsd.edu/ http://gsbl.ucsd.edu/]) | ** Genomics and Systems Biotechnology Laboratory ([http://gsbl.ucsd.edu/ http://gsbl.ucsd.edu/]) | ||
** Center for Human Genomics (http://health.ucsd.edu/news/2004/06_30_Genomics.html) | ** Center for Human Genomics (http://health.ucsd.edu/news/2004/06_30_Genomics.html) | ||
==MIT== | ===MIT=== | ||
** Whitehead Institute for Biomedical Research ([http://www.wi.mit.edu/index.html http://www.wi.mit.edu/index.html]) | ** Whitehead Institute for Biomedical Research ([http://www.wi.mit.edu/index.html http://www.wi.mit.edu/index.html]) | ||
** Department of Biological Engineering ([http://web.mit.edu/be/index.htm http://web.mit.edu/be/index.htm]) | ** Department of Biological Engineering ([http://web.mit.edu/be/index.htm http://web.mit.edu/be/index.htm]) | ||
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** '''MIT/NIGMS Biotechnology Training Program ([http://web.mit.edu/bpec/biotech/index.htm http://web.mit.edu/bpec/biotech/index.htm])''' | ** '''MIT/NIGMS Biotechnology Training Program ([http://web.mit.edu/bpec/biotech/index.htm http://web.mit.edu/bpec/biotech/index.htm])''' | ||
*** '''Trains students to work in multipliscinary manner within the biotech industry''' | *** '''Trains students to work in multipliscinary manner within the biotech industry''' | ||
==Harvard== | ===Harvard=== | ||
** Department of Chemistry and Chemical Biology (http://www.chem.harvard.edu/intro/mission.php) | ** Department of Chemistry and Chemical Biology (http://www.chem.harvard.edu/intro/mission.php) | ||
** '''Harvard Biotechnology Club ([http://www.thebiotechclub.org/index.php http://www.thebiotechclub.org/index.php])''' | ** '''Harvard Biotechnology Club ([http://www.thebiotechclub.org/index.php http://www.thebiotechclub.org/index.php])''' | ||
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** HMS and Partners Center for Genetics and Genomics ([http://www.hpcgg.org/ http://www.hpcgg.org/]) | ** HMS and Partners Center for Genetics and Genomics ([http://www.hpcgg.org/ http://www.hpcgg.org/]) | ||
*** promotes genetics and genomics in clinical medicine | *** promotes genetics and genomics in clinical medicine | ||
==Wisconsin== | ===Wisconsin=== | ||
==Navigation== | ==Navigation== | ||
[[Bibliography for Item 8 in BGP]]<br> | [[Bibliography for Item 8 in BGP]]<br> | ||
[[Biotechnology_-_Genomic_and_Proteomics]] | [[Biotechnology_-_Genomic_and_Proteomics]] |
Revision as of 17:16, 14 April 2009
Answer the questions:
- What are the 5 top Universities in this field?
- Correlate them with their main outputs (Data. Narratives. Tools)
- Understand and identify cases where these universities are “experimenting” or “adopting” commons based approach. Are they adopting OA policies, for instance? Are they adopting Social Responsible License approaches?
- Identify these cases and treat them as entities that will also be placed in our mapping device (the quadrants)
- Identify what universities are the “Microsofts” of the field and what companies are the “IBMs” of the field (Use the questionnaire to guide your research when appropriate - Carol will select specific relevant questions)
Introduction
American universities are granted over 3,000 U.S. patents each year and maintain a portfolio of over 40,000 patents (see Owen-Smith & Powell, 2003).
Universities and R&D in Biotechnology
Note: I have bolded those projects that appear to be experimenting with commons-based approaches. From initial research, it seems that Stanford is the IBM of the university field, UC San Diego is the Microsoft
Stanford
- Department of Biochemistry, School of Medicine (http://biochemistry.stanford.edu/)
- 135 labs in 11 departments
- Equipment shared between departments - possible source of collaboration
- Graduate Training Program in Biotechnology (http://www.stanford.edu/group/biotech/)
- multidisciplinary, focusing on theoretical, experimental, and computational aspects of the field
- Genome Technology Center (http://med.stanford.edu/sgtc/)
- Inventing new processes for genomic research
- Stanford Medical Informatics (http://smi.stanford.edu/)
- Interdisciplinary research group focusing on how data is used in biotech research
- BIO-X (http://biox.stanford.edu/biox/index.html)
- Specific aim to foster collaboration between scientists, engineers, computer scientists, and clinicians in the biotech sector
- Department of Biochemistry, School of Medicine (http://biochemistry.stanford.edu/)
Berkeley
- Center for Integrative Genomics (http://cigbrowser.berkeley.edu/)
- Collaborative project between several different departments to compare genome sequences of a wide variety of animals
- UC Biotech.org (http://ucbiotech.org/)
- provides educational materials on agriculture and technology
- Graduate Group in Computational and Genomic Biology (http://computationalbiology.berkeley.edu/)
- provides training in the intersection of computational biology and genomics
- Berkeley Bioinformatics Open Source Project
- Gene Ontology Project: aims to reach consistent descriptions of gene products
- Division of Genetics, Genomics, and Development (http://mcb.berkeley.edu/)
- studies replication, structure and evolution of genomes
- Department of Plant and Microbial Biology (http://pmb.berkeley.edu/)
- studies plant genomics
- Center for Integrative Genomics (http://cigbrowser.berkeley.edu/)
UC San Diego
- Department of Bioengineering (http://www-bioeng.ucsd.edu/who/)
- Genomics and Systems Biotechnology Laboratory (http://gsbl.ucsd.edu/)
- Center for Human Genomics (http://health.ucsd.edu/news/2004/06_30_Genomics.html)
MIT
- Whitehead Institute for Biomedical Research (http://www.wi.mit.edu/index.html)
- Department of Biological Engineering (http://web.mit.edu/be/index.htm)
- Biotechnology Process Engineering Center (http://web.mit.edu/bpec/)
- MIT/NIGMS Biotechnology Training Program (http://web.mit.edu/bpec/biotech/index.htm)
- Trains students to work in multipliscinary manner within the biotech industry
Harvard
- Department of Chemistry and Chemical Biology (http://www.chem.harvard.edu/intro/mission.php)
- Harvard Biotechnology Club (http://www.thebiotechclub.org/index.php)
- foster events to bridge gap between biotech academia and business
- Graduate program in Biotechnology (http://www.extension.harvard.edu/biotech/)
- Program in Quantitative Genomics (http://www.hsph.harvard.edu/research/pqg/research/)
- HMS and Partners Center for Genetics and Genomics (http://www.hpcgg.org/)
- promotes genetics and genomics in clinical medicine
Wisconsin
Bibliography for Item 8 in BGP
Biotechnology_-_Genomic_and_Proteomics